STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_1090Nitrilotriacetate monooxygenase component B. (203 aa)    
Predicted Functional Partners:
BAB1_1091
Nitroreductase family.
  
 
 0.823
BAB1_0645
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
    
 0.711
BAB1_0313
NUDIX hydrolase.
  
 
  0.704
BAB1_1484
Isochorismatase hydrolase family.
  
 
 0.661
BAB1_0867
Glyoxalase/Bleomycin resistance protein/dioxygenase domain.
    
  0.640
BAB2_1027
Phosphoribosyltransferase:Uracil phosphoribosyl transferase; Belongs to the UPRTase family.
  
  
  0.640
BAB2_0193
Riboflavin kinase / FAD synthetase:Cytidyltransferase-related domain; Belongs to the ribF family.
    
  0.633
ribE
Rhodopsin-like GPCR superfamily:Lumazine-binding protein; Catalyzes the dismutation of two molecules of 6,7-dimethyl-8- ribityllumazine, resulting in the formation of riboflavin and 5-amino- 6-(D-ribitylamino)uracil.
    
  0.595
BAB1_1111
Bacterial luciferase.
  
 
 0.582
BAB1_2052
Bacterial luciferase.
  
 
 0.582
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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