STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_1537Bacterial regulatory protein, MarR family. (179 aa)    
Predicted Functional Partners:
BAB1_1536
Conserved hypothetical protein.
       0.613
BAB1_0911
Conserved hypothetical protein.
  
     0.553
BAB1_1538
Response regulator receiver:Transcriptional regulatory protein, C terminal.
       0.551
BAB2_0441
Transcriptional regulatory protein, lysR family.
      
 0.491
BAB1_1570
Lipid A-myristate beta-hydroxylase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
      
 0.487
BAB1_0908
ATP/GTP-binding site motif A (P-loop).
  
     0.473
BAB1_1781
DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Aldehyde dehydrogenase.
  
     0.447
BAB1_1141
ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sensor protein, C-terminal:Histidine kinase.
  
     0.444
BAB1_1535
C-5 cytosine-specific DNA methylase.
       0.416
moaD
ThiamineS.
  
     0.415
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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