| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplM | rplU | BAB1_0811 | BAB1_1858 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
| rplM | rpmB | BAB1_0811 | BAB1_2016 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L28:ATP/GTP-binding site motif A (P-loop); Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplM | rpmG | BAB1_0811 | BAB2_0631 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.998 |
| rplM | rpoC | BAB1_0811 | BAB1_1263 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | RNA polymerase, alpha subunit:RNA polymerase I subunit A, N-terminal:RNA polymerase Rpb1, domain 1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rplM | rpsD | BAB1_0811 | BAB1_0851 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Conserved hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rplM | rpsF | BAB1_0811 | BAB1_0480 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.998 |
| rplM | rpsI | BAB1_0811 | BAB1_0810 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsO | BAB1_0811 | BAB1_2168 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S15:Ribosomal protein S15, bacterial chloroplast and mitochondrial type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |
| rplM | rpsR | BAB1_0811 | BAB1_0479 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
| rplM | rpsT | BAB1_0811 | BAB1_2186 | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.998 |
| rplU | rplM | BAB1_1858 | BAB1_0811 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein L13:Ribosomal protein L13, bacterial and organelle form; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rplU | rpmB | BAB1_1858 | BAB1_2016 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein L28:ATP/GTP-binding site motif A (P-loop); Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
| rplU | rpmG | BAB1_1858 | BAB2_0631 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.998 |
| rplU | rpoC | BAB1_1858 | BAB1_1263 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | RNA polymerase, alpha subunit:RNA polymerase I subunit A, N-terminal:RNA polymerase Rpb1, domain 1; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| rplU | rpsD | BAB1_1858 | BAB1_0851 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Conserved hypothetical protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
| rplU | rpsF | BAB1_1858 | BAB1_0480 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.998 |
| rplU | rpsI | BAB1_1858 | BAB1_0810 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplU | rpsO | BAB1_1858 | BAB1_2168 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein S15:Ribosomal protein S15, bacterial chloroplast and mitochondrial type; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.999 |
| rplU | rpsR | BAB1_1858 | BAB1_0479 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.998 |
| rplU | rpsT | BAB1_1858 | BAB1_2186 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.999 |