STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0191Haloacid dehalogenase-like hydrolase:HAD-superfamily subfamily IIA hydrolase, hypothetical 3:HAD-superfamily hydrolase, subfa. (283 aa)    
Predicted Functional Partners:
BAB1_0686
Conserved hypothetical protein.
 
  
 0.752
BAB1_1539
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein, C-term.
  
 
   0.702
BAB1_1838
Pyridoxal kinase; Belongs to the pyridoxine kinase family.
  
  
 0.667
BAB1_1188
Glycerophosphoryl diester phosphodiesterase.
    
  0.640
BAB1_2159
Helix-turn-helix motif.
  
     0.640
hisS
Histidine--tRNA ligase; tRNA synthetases, class-II (G, H, P and S):Anticodon binding domain:Histidyl-tRNA synthetase, class IIa:Aminoacyl-transfer RN.
 
    0.633
BAB2_0177
Aldo/keto reductase.
   
 
 0.631
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
   
 
 0.620
pgsA
CDP-alcohol phosphatidyltransferase:NADH-ubiquinone oxidoreductase, chain 4:CDP-diacylglycerol--glycerol-3-phosphate 3-phosph..; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.619
lldD
FMN-dependent alpha-hydroxy acid dehydrogenase:FMN/related compound-binding core.
   
 
 0.606
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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