STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0423Bacterial regulatory protein, GntR family. (257 aa)    
Predicted Functional Partners:
BAB1_1962
Bacterial regulatory proteins, AsnC family:Bacterial regulatory protein, GntR family.
  
     0.775
BAB1_1730
Bacterial regulatory protein, GntR family.
  
     0.772
BAB2_0022
Bacterial regulatory protein, GntR family.
  
    0.745
uxuA
ABC transporter, family 2:Acriflavin resistance protein:Sodium:dicarboxylate symporter; Catalyzes the dehydration of D-mannonate.
 
   
 0.728
BAB2_0290
Bacterial regulatory protein, GntR family.
  
    0.723
BAB2_0811
Bacterial regulatory protein, GntR family.
  
    0.679
BAB2_0172
Bacterial regulatory protein, GntR family:Bacterial regulatory protein, DeoR family.
  
    0.620
BAB2_0426
Glucuronate isomerase, putative; Belongs to the mannitol dehydrogenase family.
     0.595
BAB2_0191
Haloacid dehalogenase-like hydrolase:HAD-superfamily subfamily IIA hydrolase, hypothetical 3:HAD-superfamily hydrolase, subfa.
      
 0.518
cobB
Hydrogenobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
      
 0.510
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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