STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0429Binding-protein-dependent transport systems inner membrane component:Tumour necrosis factor c/lymphotoxin-beta. (299 aa)    
Predicted Functional Partners:
BAB2_0428
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase; Belongs to the ABC transporter superfamily.
 
  0.974
BAB2_0427
ABC transporter, periplasmic substrate-binding protein.
 
  
  0.940
BAB2_0430
Binding-protein-dependent transport systems inner membrane component.
 
  
 
0.879
BAB1_0240
Binding-protein-dependent transport systems inner membrane component.
  
  0.726
BAB2_0489
Binding-protein-dependent transport systems inner membrane component:C-5 cytosine-specific DNA methylase.
  
  0.724
BAB1_0241
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase; Belongs to the ABC transporter superfamily.
  
  0.696
BAB2_0493
Putative ATP-binding protein BAB2_0493; Probably part of an ABC transporter complex. Probably responsible for energy coupling to the transport system (Probable).
  
  0.693
BAB2_0431
D-galactarate dehydratase/Altronate hydrolase, N-terminal:D-galactarate dehydratase/Altronate hydrolase, C-terminal.
 
     0.686
BAB2_1143
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase; Belongs to the ABC transporter superfamily.
  
  0.677
ugpC
Hypothetical; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  
  0.670
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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