STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0431D-galactarate dehydratase/Altronate hydrolase, N-terminal:D-galactarate dehydratase/Altronate hydrolase, C-terminal. (514 aa)    
Predicted Functional Partners:
BAB2_0426
Glucuronate isomerase, putative; Belongs to the mannitol dehydrogenase family.
 
 0.973
uxuA
ABC transporter, family 2:Acriflavin resistance protein:Sodium:dicarboxylate symporter; Catalyzes the dehydration of D-mannonate.
 
 
 0.896
BAB2_1115
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  0.800
BAB1_0242
Mandelate racemase/muconate lactonizing enzyme.
 
  
 0.692
BAB2_0429
Binding-protein-dependent transport systems inner membrane component:Tumour necrosis factor c/lymphotoxin-beta.
 
     0.686
BAB2_0430
Binding-protein-dependent transport systems inner membrane component.
 
     0.659
BAB1_0248
Mandelate racemase/muconate lactonizing enzyme.
    
 0.658
BAB2_0960
Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.648
dapA
Dihydrodipicolinate synthetase:Dihydrodipicolinate synthase subfamily; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.644
BAB1_0864
HpcH/HpaI aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  0.637
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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