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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0484FecCD transport family:Thiolase; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (347 aa)    
Predicted Functional Partners:
BAB2_0485
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
 0.999
BAB2_0483
Periplasmic binding protein.
 
 0.997
BAB1_1364
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
 0.996
BAB1_1366
Periplasmic binding protein.
 
 0.981
BAB2_0482
Prenyl group binding site (CAAX box).
       0.773
BAB2_0486
Conserved hypothetical protein.
       0.596
BAB2_0016
Condensation domain.
 
  
 0.587
BAB2_0563
FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
0.543
BAB2_0013
Isochorismatase hydrolase family:Isochorismatase:Phosphopantetheine attachment site:Phosphopantetheine-binding domain.
  
  
 0.542
BAB2_0481
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.519
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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