STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0493Putative ATP-binding protein BAB2_0493; Probably part of an ABC transporter complex. Probably responsible for energy coupling to the transport system (Probable). (350 aa)    
Predicted Functional Partners:
BAB2_0489
Binding-protein-dependent transport systems inner membrane component:C-5 cytosine-specific DNA methylase.
  0.937
BAB2_0771
ABC transporter, family 2:Polycystic kidney disease type 1 protein.
 
   
  0.933
BAB2_0490
Probable ABC transporter permease protein BAB2_0490; Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable).
 
  0.932
BAB1_1683
Conserved hypothetical protein.
 
   
  0.911
BAB1_0240
Binding-protein-dependent transport systems inner membrane component.
 
  0.899
BAB2_1142
Binding-protein-dependent transport systems inner membrane component; Possible sugar ABC transporter, permease protein, putative KO: K02026 multiple sugar/glycerol-3P transport system permease.
 
  0.892
BAB1_0239
Binding-protein-dependent transport systems inner membrane component.
  
  0.883
ugpE
Binding-protein-dependent transport systems inner membrane component:Aromatic amino acid permease; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 
  0.877
ndvA
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA; Involved in beta-(1-->2)glucan export. Its export to the periplasmic space is required to exert its action as a virulence factor. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (Probable); Belongs to the ABC transporter superfamily. Beta- (1-->2)glucan exporter (TC 3.A.1.108.1) family.
 
     
0.865
BAB2_0491
Putative binding protein BAB2_0491; Probably part of an ABC transporter complex.
 
  0.856
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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