STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugdFlavin-containing monooxygenase FMO:UDP-glucose/GDP-mannose dehydrogenase:TrkA potassium uptake protein. (474 aa)    
Predicted Functional Partners:
BAB2_0695
NAD-dependent epimerase/dehydratase.
 0.993
BAB2_0959
Membrane protein, putative.
  
  
 0.954
galU
UTP-glucose-1-phosphate uridylyltransferase:Nucleotidyl transferase.
 
 0.909
BAB2_0693
Glycosyl transferase, group 2 family protein.
 
 
 0.903
BAB1_0561
Mannose-6-phosphate isomerase, type II:Nucleotidyl transferase:Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate is..; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.881
BAB2_0856
Mannose-6-phosphate isomerase, type II:ATP/GTP-binding site motif A (P-loop):Nucleotidyl transferase:Mannose-1-phosphate guan..; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
 
 0.880
BAB2_0711
Surf1 protein.
 
      0.869
galE-2
NAD binding site:NAD-dependent epimerase/dehydratase:UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.865
BAB2_0690
Endoglucanase family protein; Belongs to the glycosyl hydrolase 26 family.
    
  0.857
BAB1_0802
Bacterial sugar transferase.
    
 0.827
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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