STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0768ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase. (255 aa)    
Predicted Functional Partners:
BAB2_0769
Binding-protein-dependent transport systems inner membrane component.
 
 0.986
BAB2_0767
Twin-arginine translocation pathway signal.
 
 
 0.968
BAB2_1148
Binding-protein-dependent transport systems inner membrane component; Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable).
 
 0.879
BAB1_0212
RNA-binding region RNP-1 (RNA recognition motif):Binding-protein-dependent transport systems inner membrane component.
 
 0.825
BAB1_1683
Conserved hypothetical protein.
 
      0.819
BAB2_0918
Binding-protein-dependent transport systems inner membrane component.
 
 0.782
modB
Binding-protein-dependent transport systems inner membrane component:Molybdate porter; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.718
BAB2_1146
Bacterial extracellular solute-binding protein, family 3; Probably part of an ABC transporter complex.
 
 0.717
BAB2_0557
Binding-protein-dependent transport systems inner membrane component.
 
      0.650
BAB1_0214
ABC transporter substrate-binding protein KO: K02051 sulfonate/nitrate transport system substrate-binding protein.
 
 
 0.598
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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