STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0804Fucose synthetase family protein. (415 aa)    
Predicted Functional Partners:
BAB2_0099
Lipopolysaccharide biosynthesis.
 
 0.999
BAB2_0805
Lipopolysaccharide biosynthesis.
 
 0.999
BAB1_0805
Conserved domain protein.
  
 0.997
BAB1_0802
Bacterial sugar transferase.
 
 
 0.991
BAB1_0542
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
  
  
 0.786
rfbD
ABC transporter, family 2:Acriflavin resistance protein.
  
  
 0.778
BAB2_0806
Bacterial regulatory protein, LuxR family:Response regulator receiver.
 
     0.736
BAB1_0534
Polysaccharide biosynthesis protein CapD.
  
 
 0.623
BAB1_0561
Mannose-6-phosphate isomerase, type II:Nucleotidyl transferase:Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate is..; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.620
BAB2_0856
Mannose-6-phosphate isomerase, type II:ATP/GTP-binding site motif A (P-loop):Nucleotidyl transferase:Mannose-1-phosphate guan..; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.620
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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