BAB2_0831 protein (Brucella abortus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BAB2_0831

Zinc-containing alcohol dehydrogenase superfamily. (335 aa)

Predicted Functional Partners:

fabD

0.915

BAB1_0486

0.913

BAB1_0872

0.913

BAB2_0016

0.809

BAB2_1042

0.781

BAB2_0444

0.763

BAB2_0266

0.572

BAB2_0830

0.551

BAB2_0826

0.523

BAB1_1036

0.519

Your Current Organism:

Brucella abortus

NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAB1_0486	BAB1_0872	BAB1_0486	BAB1_0872	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.655
BAB1_0486	BAB1_1036	BAB1_0486	BAB1_1036	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	0.519
BAB1_0486	BAB2_0016	BAB1_0486	BAB2_0016	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Condensation domain.	0.788
BAB1_0486	BAB2_0826	BAB1_0486	BAB2_0826	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase.	0.457
BAB1_0486	BAB2_0831	BAB1_0486	BAB2_0831	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Zinc-containing alcohol dehydrogenase superfamily.	0.913
BAB1_0486	BAB2_1042	BAB1_0486	BAB2_1042	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Alpha/beta hydrolase fold:Biotin/lipoyl attachment:Esterase/lipase/thioesterase, active site:2-oxo acid dehydrogenase, acyltr.	0.707
BAB1_0486	fabD	BAB1_0486	BAB1_0482	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	Acyl transferase domain:Malonyl CoA-acyl carrier protein transacylase.	0.998
BAB1_0872	BAB1_0486	BAB1_0872	BAB1_0486	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	0.655
BAB1_0872	BAB1_1036	BAB1_0872	BAB1_1036	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	0.519
BAB1_0872	BAB2_0016	BAB1_0872	BAB2_0016	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Condensation domain.	0.788
BAB1_0872	BAB2_0826	BAB1_0872	BAB2_0826	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase.	0.457
BAB1_0872	BAB2_0831	BAB1_0872	BAB2_0831	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Zinc-containing alcohol dehydrogenase superfamily.	0.913
BAB1_0872	BAB2_1042	BAB1_0872	BAB2_1042	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Alpha/beta hydrolase fold:Biotin/lipoyl attachment:Esterase/lipase/thioesterase, active site:2-oxo acid dehydrogenase, acyltr.	0.707
BAB1_0872	fabD	BAB1_0872	BAB1_0482	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	Acyl transferase domain:Malonyl CoA-acyl carrier protein transacylase.	0.997
BAB1_1036	BAB1_0486	BAB1_1036	BAB1_0486	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	Protein kinase:Beta-ketoacyl synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.	0.519
BAB1_1036	BAB1_0872	BAB1_1036	BAB1_0872	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	Beta-ketoacyl synthase:ATP/GTP-binding site motif A (P-loop); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.	0.519
BAB1_1036	BAB2_0444	BAB1_1036	BAB2_0444	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	NAD binding site:Enoyl-CoA hydratase/isomerase:3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, N..; Belongs to the enoyl-CoA hydratase/isomerase family.	0.846
BAB1_1036	BAB2_0826	BAB1_1036	BAB2_0826	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase.	0.428
BAB1_1036	BAB2_0831	BAB1_1036	BAB2_0831	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	Zinc-containing alcohol dehydrogenase superfamily.	0.519
BAB1_1036	BAB2_1042	BAB1_1036	BAB2_1042	Malic oxidoreductase:Phosphate acetyl/butaryl transferase.	Alpha/beta hydrolase fold:Biotin/lipoyl attachment:Esterase/lipase/thioesterase, active site:2-oxo acid dehydrogenase, acyltr.	0.879