STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0848Catalase. (499 aa)    
Predicted Functional Partners:
hfq
Host factor Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (By similarity). Contributes to long-term survival under nutrient deprivation, to stationary phase-dependent hydrogen peroxide and acid stress resistance and is required for prolonged survival in the intracellular environment of the host macrophage. Therefore, contributes not only to a generalized stress response in stationary p [...]
    
 
 0.907
ahpC
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
   
 
 0.903
trxB
Thioredoxin reductase; Pyridine nucleotide-disulphide oxidoreductase, class-II:Adrenodoxin reductase:Pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.831
BAB1_1219
Family of unknown function ThiJ/PfpI:Intracellular protease PfpI.
  
 0.821
BAB1_1221
Isocitrate/isopropylmalate dehydrogenase:Isocitrate dehydrogenase NADP-dependent, eukaryotic; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 0.800
BAB1_0591
Manganese and iron superoxide dismutase:ATP/GTP-binding site motif A (P-loop); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.736
ilvB
Pyruvate decarboxylase:Acetolactate synthase large subunit biosynthetic type.
   
 0.709
BAB2_0289
Pyruvate decarboxylase; Belongs to the TPP enzyme family.
   
 0.709
BAB1_1413
Periplasmic serine endoprotease DegP-like; Serine proteases, V8 family:Serine protease, trypsin family:PDZ/DHR/GLGF domain:HtrA/DegQ protease:Glucose/ribitol dehydrogenase; Belongs to the peptidase S1C family.
   
 0.706
htrA
Serine proteases, V8 family:Serine protease, trypsin family:PDZ/DHR/GLGF domain:HtrA/DegQ protease; Might be efficient in the degradation of transiently denatured and unfolded proteins which accumulate in the periplasm following stress conditions.
   
 0.669
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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