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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0899ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:TOBE domain. (333 aa)    
Predicted Functional Partners:
BAB2_0771
ABC transporter, family 2:Polycystic kidney disease type 1 protein.
 
   
  0.928
BAB2_0489
Binding-protein-dependent transport systems inner membrane component:C-5 cytosine-specific DNA methylase.
 
  0.900
BAB1_0240
Binding-protein-dependent transport systems inner membrane component.
 
  0.896
BAB2_0490
Probable ABC transporter permease protein BAB2_0490; Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable).
  
  0.890
BAB2_1142
Binding-protein-dependent transport systems inner membrane component; Possible sugar ABC transporter, permease protein, putative KO: K02026 multiple sugar/glycerol-3P transport system permease.
 
  0.887
ugpE
Binding-protein-dependent transport systems inner membrane component:Aromatic amino acid permease; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 
  0.881
BAB1_0239
Binding-protein-dependent transport systems inner membrane component.
  
  0.880
BAB1_1683
Conserved hypothetical protein.
 
   
  0.873
BAB2_0926
ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
 
   
 
0.858
BAB2_0719
CD9/CD37/CD63 antigen:Binding-protein-dependent transport systems inner membrane component:Delayed-early response protein/equ.
  
  0.808
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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