STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrRCyclic nucleotide-binding domain:Bacterial regulatory protein, Crp family. (232 aa)    
Predicted Functional Partners:
BAB2_0921
Blue (type 1) copper domain:Blue (type 1) copper protein:Amicyanin:Plastocyanin.
 
   
 0.821
gltB
Glutamate synthase amidotransferase domain:Glutamate synthase central domain.
    
 0.795
rpoA
RNA polymerase, alpha chain, bacterial and organelle; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.782
BAB1_0346
Na+/solute symporter:Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Bacterial sen.
  
 0.781
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.775
BAB2_0943
Multicopper oxidase, type 1:Copper-containing nitrite reductase:Twin-arginine translocation pathway signal; Belongs to the multicopper oxidase family.
  
   
 0.710
BAB2_0920
Conserved hypothetical protein.
 
     0.709
BAB2_0518
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.702
BAB1_1036
Malic oxidoreductase:Phosphate acetyl/butaryl transferase.
   
 
 0.690
BAB1_0507
PAS domain:GGDEF:PAS-associated C-terminal domain:PAC motif:EAL domain.
  
 0.673
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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