STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0954Cytochrome c oxidase, subunit I. (449 aa)    
Predicted Functional Partners:
BAB2_0955
Cytochrome c heme-binding site.
 
 0.999
BAB1_0389
Cbb3-type cytochrome c oxidase subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.986
norD
Von Willebrand factor, type A; Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection (By similarity).
 
  
 0.983
BAB2_0929
FMN-binding domain.
 
  
 0.971
nosZ
Twin-arginine translocation pathway signal; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
 
 0.959
BAB2_0953
Chaperonin clpA/B:ATP/GTP-binding site motif A (P-loop).
 
  
 0.957
BAB2_0943
Multicopper oxidase, type 1:Copper-containing nitrite reductase:Twin-arginine translocation pathway signal; Belongs to the multicopper oxidase family.
 
  
 0.864
BAB2_0957
Cytochrome c oxidase, subunit III.
 
    0.814
nosD
Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis:Periplasmic copper-binding.
  
    0.795
nosY
Nitrous-oxide reductase, nosY component.
  
  
 0.793
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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