STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0959Membrane protein, putative. (422 aa)    
Predicted Functional Partners:
ugd
Flavin-containing monooxygenase FMO:UDP-glucose/GDP-mannose dehydrogenase:TrkA potassium uptake protein.
  
  
 0.954
BAB1_0802
Bacterial sugar transferase.
  
  
 0.924
galU
UTP-glucose-1-phosphate uridylyltransferase:Nucleotidyl transferase.
    
 0.672
BAB2_0106
Blood group Rhesus C/E and D polypeptide:O-antigen polymerase.
  
  
 0.614
BAB1_0805
Conserved domain protein.
  
  
 0.601
BAB2_0099
Lipopolysaccharide biosynthesis.
  
  
 0.601
BAB2_0805
Lipopolysaccharide biosynthesis.
  
  
 0.601
gatC
Glu-tRNAGln amidotransferase, C subunit:Glutamyl-tRNA(Gln) amidotransferase C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
   
    0.593
BAB1_1617
Oxidoreductase, N-terminal:Oxidoreductase, C-terminal.
  
  
 0.554
BAB1_0561
Mannose-6-phosphate isomerase, type II:Nucleotidyl transferase:Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate is..; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.495
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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