STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgsAMethylglyoxal synthase-like domain:Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. (125 aa)    
Predicted Functional Partners:
dapB
Eukaryotic thiol (cysteine) protease:Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
  
    0.862
BAB1_1570
Lipid A-myristate beta-hydroxylase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.859
coaE
ATP/GTP-binding site motif A (P-loop):Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
 
    0.710
gltB
Glutamate synthase amidotransferase domain:Glutamate synthase central domain.
    
  0.666
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
     
 0.650
BAB2_0177
Aldo/keto reductase.
     
 0.646
gpsA
Adrenodoxin reductase:NAD-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
  0.637
mdh
Lactate/malate dehydrogenase:L-lactate dehydrogenase:TrkA potassium uptake protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
     
 0.634
pyrB
Aspartate carbamoyltransferase:Ornithine carbamoyltransferase:Aspartate/ornithine carbamoyltransferase:Aspartate/ornithine ca..; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
    
 0.615
carA
Glutamine amidotransferase class-I:Carbamoyl-phosphate synthase, GATase domain:Carbamoyl-phosphate synthase, small chain:Anth..; Belongs to the CarA family.
    
  0.611
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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