STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylGATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family. (511 aa)    
Predicted Functional Partners:
xylF
ATP/GTP-binding site motif A (P-loop):Periplasmic binding protein/LacI transcriptional regulator:Twin-arginine translocation.
 
 0.934
BAB2_0376
Bacterial inner-membrane translocator:Sodium:dicarboxylate symporter; Belongs to the binding-protein-dependent transport system permease family.
 
  0.932
rbsC-5
Bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.910
BAB2_1111
Bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.909
rbsC-1
Tetracycline resistance protein TetB:Bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  0.899
rbsC-2
Bacterial inner-membrane translocator:Voltage-dependent potassium channel; Belongs to the binding-protein-dependent transport system permease family.
 
  0.897
rbsC-4
Bacterial inner-membrane translocator:Glucose/ribitol dehydrogenase; Belongs to the binding-protein-dependent transport system permease family.
 
  0.868
BAB2_0300
Bacterial inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.812
BAB1_1648
Periplasmic binding protein/LacI transcriptional regulator.
  
  0.796
BAB2_0771
ABC transporter, family 2:Polycystic kidney disease type 1 protein.
 
      0.744
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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