STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tupBTungsten ABC transporter TupABC, permease protein; Pfam match to PF00528.17 BPD_transp_1. (230 aa)    
Predicted Functional Partners:
tupA
Tungsten ABC transporter TupABC, periplasmic tungstate-binding protein; Pfam matches to PF12849.2 PBP_like_2, and to PF13531.1 SBP_bac_11.
 
  
 0.986
tupC
Tungsten ABC transporter TupABC, ATP-binding protein; Pfam matches to PF00005.22 ABC_tran, and to PF13304.1 AAA_21; Belongs to the ABC transporter superfamily.
 
  
 0.973
fdhA
Formate dehydrogenase N, alpha subunit, selenocysteine-containing; Pfam matches to PF00384.17 Molybdopterin, and to PF01568.16 Molydop_binding, and to PF04879.11 Molybdop_Fe4S4; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.611
fdhB
Formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit; Pfam matches to PF13247.1 Fer4_11, and to PF12838.2 Fer4_7, and to PF13187.1 Fer4_9, and to PF00037.22 Fer4, and to PF12797.2 Fer4_2, and to PF12837.2 Fer4_6, and to PF13237.1 Fer4_10.
 
     0.510
EAT97946.2
Transcriptional regulator, ModE family; Pfam matches to PF03459.12 TOBE, and to PF03459.12 TOBE, and to PF00126.22 HTH_1.
     
 0.509
fdhM
Formate dehydrogenase-associated chaperone; Pfam match to PF02613.10 Nitrate_red_del.
  
    0.459
EAT98364.1
Putative formate dehydrogenase-associated protein.
       0.418
fdhD
Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.418
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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