STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT97649.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
EAT97663.3
Hypothetical protein.
       0.773
EAT97689.1
Hypothetical protein.
       0.773
EAT97679.1
Helix-turn-helix domain protein, putative transcriptional regulator; Pfam matches to PF12728.2 HTH_17, and to PF05930.7 Phage_AlpA.
       0.773
EAT97683.1
Hypothetical protein.
      
 0.701
ABV23506.1
Hypothetical protein.
      
 0.701
EAT97671.1
Hypothetical protein.
       0.615
EAT98193.1
Putative membrane protein, putative O-glycosylation ligase; Pfam match to PF13425.1 O-antigen_lig.
      
 0.516
legF
CMP-legionaminic acid synthetase; Pfam match to PF02348.14 CTP_transf_3.
      
 0.471
legG
GDP-2,4-diacetamido-2,4, 6-trideoxy-alpha-D-glucopyranose hydrolase / 2-epimerase; Pfam match to PF02350.14 Epimerase_2.
      
 0.471
legI
Legionaminic acid synthase; Pfam matches to PF03102.9 NeuB, and to PF08666.7 SAF.
      
 0.471
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.