STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT98923.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
EAT98822.1
Hypothetical protein.
       0.746
EAT98905.1
PD-(D/E)XK nuclease domain protein; Pfam match to PF14281.1 PDDEXK_4.
       0.741
EAT98916.3
Hypothetical protein.
       0.651
EAT98838.1
Peptidyl-arginine deiminase; Pfam matches to PF04371.10 PAD_porph, and to PF02274.12 Amidinotransf; Belongs to the agmatine deiminase family.
       0.555
EAT98831.1
Hypothetical protein.
       0.470
EAT98860.1
Putative protein (DUF2130 domain); Pfam match to PF09903.4 DUF2130.
       0.400
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.