STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT98685.1PAS sensor-containing signal-transduction protein; Pfam matches to PF13426.1 PAS_9, and to PF00989.19 PAS, and to PF08447.6 PAS_3. (166 aa)    
Predicted Functional Partners:
EAT98625.1
MCP-domain signal transduction protein; Pfam match to PF00015.16 MCPsignal.
 
 0.965
ABW74749.1
Hypothetical protein.
  
 
 0.893
ABW74839.1
Cache sensor-containing MCP-domain signal transduction protein; Pfam matches to PF00015.16 MCPsignal, and to PF08269.6 Cache_2, and to PF00672.20 HAMP.
 
   0.801
cheV
Chemotaxis signal transduction protein CheV; Pfam matches to PF01584.14 CheW, and to PF00072.19 Response_reg.
 
 
 0.799
ctsE
Transformation system, type II secretion system ATPase CtsE; Pfam matches to PF00437.15 T2SE, and to PF05157.10 T2SE_Nter.
   
 
 0.725
EAT98601.1
ATPase, AAA family; Pfam matches to PF13401.1 AAA_22, and to PF09848.4 DUF2075, and to PF05729.7 NACHT, and to PF07693.9 KAP_NTPase.
 
     0.723
ctsF
Transformation system, type II secretion system membrane protein CtsF; Pfam matches to PF00482.18 T2SF, and to PF00482.18 T2SF.
       0.698
EAT98636.1
Hypothetical protein.
       0.692
EAT98611.1
Hypothetical protein; Pfam match to PF12895.2 Apc3.
     
 0.692
ctsD
Transformation system, type II secretion system secretin protein CtsD; Pfam matches to PF00263.16 Secretin, and to PF07660.9 STN, and to PF07655.8 Secretin_N_2.
       0.686
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.