STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctAC4-dicarboxylate transport protein; Pfam match to PF00375.13 SDF; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (451 aa)    
Predicted Functional Partners:
EAT98959.1
TRAP-type transport system, small permease; Pfam match to PF04290.7 DctQ.
     
  0.900
EAT98970.1
TRAP-type transport system, large permease; Pfam match to PF06808.7 DctM.
     
  0.900
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.787
EAT98974.1
YebC/PmpR family DNA-binding regulatory protein; Pfam match to PF01709.15 Transcrip_reg.
       0.781
dcuB
Anaerobic C4-dicarboxylate transporter; Pfam matches to PF03605.9 DcuA_DcuB, and to PF03605.9 DcuA_DcuB.
   
  
 0.740
norZ
Nitric oxide reductase, monomeric type; Pfam match to PF00115.15 COX1.
      
 0.701
mqo
Malate:quinone-oxidoreductase; Pfam matches to PF06039.10 Mqo, and to PF01266.19 DAO.
   
  
 0.660
sstT
Sodium ion-motive force-driven serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
  
     0.610
gdhA
Glutamate dehydrogenase; Pfam matches to PF00208.16 ELFV_dehydrog, and to PF02812.13 ELFV_dehydrog_N; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
      
 0.540
EAT98958.1
Aspartate racemase; Pfam match to PF01177.17 Asp_Glu_race.
       0.531
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.