STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT99160.1Metal ion ABC transporter, permease protein; Belongs to the NiCoT transporter (TC 2.A.52) family. (497 aa)    
Predicted Functional Partners:
EAT99050.1
Metal ion ABC transporter, periplasmic metal-binding protein; Pfam match to PF01297.12 TroA.
 
     0.845
EAT99151.1
Metal ion ABC transporter, membrane protein.
 
     0.834
EAT99084.1
Metal ion ABC transporter, ATP-binding protein.
     
 0.822
EAT99114.2
Transcriptional regulator, Fur family; Pfam match to PF01475.14 FUR; Belongs to the Fur family.
 
     0.665
EAT97994.1
Major facilitator superfamily transporter, possible sugar permease; Pfam matches to PF07690.11 MFS_1, and to PF05977.8 MFS_3.
  
     0.647
EAT98063.1
Putative protein (DnaJ domain); Pfam match to PF00226.26 DnaJ.
 
 
   0.485
EAT98876.1
Ferrirhodotorulic acid ABC transporter, permease protein; Pfam matches to PF10080.4 DUF2318, and to PF04945.8 YHS.
  
     0.452
EAT98737.1
Putative protein (OmpA/MotB domain); Pfam matches to PF00691.15 OmpA, and to PF13677.1 MotB_plug.
  
     0.449
tolA
Tol-Pal system subunit TolA; Pfam match to PF13103.1 TonB_2.
 
     0.433
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.