Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAT98744.1 | EAT98746.1 | CCC13826_1963 | CCC13826_1964 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Hypothetical protein. | 0.800 |
EAT98744.1 | EAT98791.1 | CCC13826_1963 | CCC13826_1961 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Hypothetical protein. | 0.800 |
EAT98744.1 | EAT98800.1 | CCC13826_1963 | CCC13826_1962 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | 0.800 |
EAT98744.1 | bamD | CCC13826_1963 | CCC13826_1959 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.505 |
EAT98744.1 | fliW | CCC13826_1963 | CCC13826_1960 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Flagellar assembly protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.657 |
EAT98744.1 | lon | CCC13826_1963 | CCC13826_1958 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | DNA-binding, ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.503 |
EAT98744.1 | raiA | CCC13826_1963 | CCC13826_1965 | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | Translation inhibitor protein RaiA; Pfam match to PF02482.14 Ribosomal_S30AE. | 0.610 |
EAT98746.1 | EAT98744.1 | CCC13826_1964 | CCC13826_1963 | Hypothetical protein. | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | 0.800 |
EAT98746.1 | EAT98791.1 | CCC13826_1964 | CCC13826_1961 | Hypothetical protein. | Hypothetical protein. | 0.800 |
EAT98746.1 | EAT98800.1 | CCC13826_1964 | CCC13826_1962 | Hypothetical protein. | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | 0.800 |
EAT98746.1 | bamD | CCC13826_1964 | CCC13826_1959 | Hypothetical protein. | Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.503 |
EAT98746.1 | fliW | CCC13826_1964 | CCC13826_1960 | Hypothetical protein. | Flagellar assembly protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.657 |
EAT98746.1 | lon | CCC13826_1964 | CCC13826_1958 | Hypothetical protein. | DNA-binding, ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.501 |
EAT98746.1 | raiA | CCC13826_1964 | CCC13826_1965 | Hypothetical protein. | Translation inhibitor protein RaiA; Pfam match to PF02482.14 Ribosomal_S30AE. | 0.610 |
EAT98791.1 | EAT98744.1 | CCC13826_1961 | CCC13826_1963 | Hypothetical protein. | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | 0.800 |
EAT98791.1 | EAT98746.1 | CCC13826_1961 | CCC13826_1964 | Hypothetical protein. | Hypothetical protein. | 0.800 |
EAT98791.1 | EAT98800.1 | CCC13826_1961 | CCC13826_1962 | Hypothetical protein. | Hypothetical protein; Pfam match to PF07963.7 N_methyl. | 0.800 |
EAT98791.1 | bamD | CCC13826_1961 | CCC13826_1959 | Hypothetical protein. | Beta-barrel assembly machinery complex, BamD/YfiO lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.598 |
EAT98791.1 | fliW | CCC13826_1961 | CCC13826_1960 | Hypothetical protein. | Flagellar assembly protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.754 |
EAT98791.1 | lon | CCC13826_1961 | CCC13826_1958 | Hypothetical protein. | DNA-binding, ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.465 |
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