STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABW74831.1UDP-GlcNac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase; Pfam matches to PF02719.10 Polysacc_synt_2, and to PF01370.16 Epimerase. (395 aa)    
Predicted Functional Partners:
EAT97953.1
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.12 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.924
ptmE
glucosamine-1-P guanylyltransferase; Pfam matches to PF00483.18 NTP_transferase, and to PF12804.2 NTP_transf_3, and to PF00571.23 CBS.
 
  
 0.863
legG
GDP-2,4-diacetamido-2,4, 6-trideoxy-alpha-D-glucopyranose hydrolase / 2-epimerase; Pfam match to PF02350.14 Epimerase_2.
 
  
 0.830
ABV23509.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.828
pseE
PseE protein, putative pseudaminic acid transferase; Pfam match to PF01973.13 MAF_flag10.
     
 0.794
legI
Legionaminic acid synthase; Pfam matches to PF03102.9 NeuB, and to PF08666.7 SAF.
  
  
 0.760
legF
CMP-legionaminic acid synthetase; Pfam match to PF02348.14 CTP_transf_3.
  
  
 0.733
ptmF
glucosamine-6-P synthase, isomerase subunit PtmF; Pfam match to PF01408.17 GFO_IDH_MocA.
     
 0.693
ptmA
glucosamine-6-P synthase, glutaminase subunit PtmA; Pfam matches to PF00106.20 adh_short, and to PF13561.1 adh_short_C2, and to PF08659.5 KR, and to PF01370.16 Epimerase.
       0.682
flgE2
Flagellar hook protein, epsilonproteobacterial variant; Pfam matches to PF06429.8 Flg_bbr_C, and to PF07559.9 FlaE, and to PF00460.15 Flg_bb_rod, and to PF07196.8 Flagellin_IN.
   
  
 0.637
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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