Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABS50422.1 | EAU01316.1 | CCV52592_2211 | CCV52592_0206 | Putative protein, possible glyoxalase/bleomycin resistance protein; Pfam matches to PF12681.2 Glyoxalase_2, and to PF00903.20 Glyoxalase. | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | 0.715 |
EAU01297.1 | EAU01316.1 | CCV52592_0205 | CCV52592_0206 | Hypothetical membrane protein; Pfam match to PF10947.3 DUF2628. | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | 0.620 |
EAU01316.1 | ABS50422.1 | CCV52592_0206 | CCV52592_2211 | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | Putative protein, possible glyoxalase/bleomycin resistance protein; Pfam matches to PF12681.2 Glyoxalase_2, and to PF00903.20 Glyoxalase. | 0.715 |
EAU01316.1 | EAU01297.1 | CCV52592_0206 | CCV52592_0205 | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | Hypothetical membrane protein; Pfam match to PF10947.3 DUF2628. | 0.620 |
EAU01316.1 | gltA | CCV52592_0206 | CCV52592_0576 | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | Pfam match to PF00285.16 Citrate_synt; Belongs to the citrate synthase family. | 0.748 |
gltA | EAU01316.1 | CCV52592_0576 | CCV52592_0206 | Pfam match to PF00285.16 Citrate_synt; Belongs to the citrate synthase family. | MmgE/PrpD family protein; Pfam match to PF03972.9 MmgE_PrpD. | 0.748 |