Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALF45152.1 | EAT99917.1 | CCV52592_0414 | CCV52592_0415 | Hypothetical protein. | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | 0.547 |
EAT99917.1 | ALF45152.1 | CCV52592_0415 | CCV52592_0414 | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | Hypothetical protein. | 0.547 |
EAT99917.1 | lysA | CCV52592_0415 | CCV52592_1665 | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.916 |
EAT99917.1 | nspC | CCV52592_0415 | CCV52592_0396 | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | 0.841 |
EAT99917.1 | polA | CCV52592_0415 | CCV52592_1705 | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.464 |
lysA | EAT99917.1 | CCV52592_1665 | CCV52592_0415 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | 0.916 |
nspC | EAT99917.1 | CCV52592_0396 | CCV52592_0415 | Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | 0.841 |
polA | EAT99917.1 | CCV52592_1705 | CCV52592_0415 | DNA polymerase I, 5' --> 3' polymerase, 5' --> 3' and 3' --> 5' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Saccharopine dehydrogenase; Pfam match to PF03435.13 Saccharop_dh. | 0.464 |