Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EAU00739.2 | aroA | CCV52592_0513 | CCV52592_0516 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.610 |
| EAU00739.2 | efp | CCV52592_0513 | CCV52592_0511 | Hypothetical protein. | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.727 |
| EAU00739.2 | ispH | CCV52592_0513 | CCV52592_0515 | Hypothetical protein. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.610 |
| EAU00739.2 | pheT | CCV52592_0513 | CCV52592_0517 | Hypothetical protein. | phenylalanyl-tRNA synthetase, beta subunit; Pfam matches to PF01588.15 tRNA_bind, and to PF03147.9 FDX-ACB, and to PF03484.10 B5, and to PF03483.12 B3_4; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.643 |
| EAU00739.2 | rpsA | CCV52592_0513 | CCV52592_0514 | Hypothetical protein. | 30S ribosomal protein S1; Pfam matches to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1. | 0.800 |
| EAU00739.2 | serA | CCV52592_0513 | CCV52592_0512 | Hypothetical protein. | Alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase; Bifunctional; Pfam matches to PF02826.14 2-Hacid_dh_C, and to PF00389.25 2-Hacid_dh, and to PF01842.20 ACT; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.800 |
| aroA | EAU00739.2 | CCV52592_0516 | CCV52592_0513 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Hypothetical protein. | 0.610 |
| aroA | efp | CCV52592_0516 | CCV52592_0511 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.617 |
| aroA | ispH | CCV52592_0516 | CCV52592_0515 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.818 |
| aroA | pheT | CCV52592_0516 | CCV52592_0517 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | phenylalanyl-tRNA synthetase, beta subunit; Pfam matches to PF01588.15 tRNA_bind, and to PF03147.9 FDX-ACB, and to PF03484.10 B5, and to PF03483.12 B3_4; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.894 |
| aroA | rpsA | CCV52592_0516 | CCV52592_0514 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 30S ribosomal protein S1; Pfam matches to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1. | 0.639 |
| aroA | serA | CCV52592_0516 | CCV52592_0512 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase; Bifunctional; Pfam matches to PF02826.14 2-Hacid_dh_C, and to PF00389.25 2-Hacid_dh, and to PF01842.20 ACT; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.650 |
| aroA | serC | CCV52592_0516 | CCV52592_1676 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.698 |
| efp | EAU00739.2 | CCV52592_0511 | CCV52592_0513 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Hypothetical protein. | 0.727 |
| efp | aroA | CCV52592_0511 | CCV52592_0516 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.617 |
| efp | ispH | CCV52592_0511 | CCV52592_0515 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.561 |
| efp | pheT | CCV52592_0511 | CCV52592_0517 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | phenylalanyl-tRNA synthetase, beta subunit; Pfam matches to PF01588.15 tRNA_bind, and to PF03147.9 FDX-ACB, and to PF03484.10 B5, and to PF03483.12 B3_4; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.753 |
| efp | rplF | CCV52592_0511 | CCV52592_1018 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.984 |
| efp | rpsA | CCV52592_0511 | CCV52592_0514 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 30S ribosomal protein S1; Pfam matches to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1, and to PF00575.18 S1. | 0.856 |
| efp | serA | CCV52592_0511 | CCV52592_0512 | Translation elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase; Bifunctional; Pfam matches to PF02826.14 2-Hacid_dh_C, and to PF00389.25 2-Hacid_dh, and to PF01842.20 ACT; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.727 |
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