STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT99803.1Type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (211 aa)    
Predicted Functional Partners:
pyrD
Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
   
 0.826
pgsA
Phosphatidylglycerophosphate synthase; Pfam match to PF01066.16 CDP-OH_P_transf; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.803
EAT99817.1
RseP-like zinc metalloprotease; Pfam matches to PF02163.17 Peptidase_M50, and to PF00595.19 PDZ.
       0.800
EAT99826.1
Short-chain dehydrogenase/reductase; Pfam matches to PF13561.1 adh_short_C2, and to PF00106.20 adh_short.
       0.800
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
       0.800
pqqL
Zn-dependent peptidase, M16 family; Pfam matches to PF05193.16 Peptidase_M16_C, and to PF00675.15 Peptidase_M16.
       0.783
EAT99430.1
Multi-copper polyphenol oxidoreductase laccase; Pfam match to PF02578.10 Cu-oxidase_4.
  
  
 0.708
cysS
cysteinyl-tRNA synthetase; Pfam matches to PF01406.14 tRNA-synt_1e, and to PF09334.6 tRNA-synt_1g, and to PF09190.6 DALR_2; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.681
msbA
Lipid A export ATP-binding/permease protein; Pfam matches to PF00664.18 ABC_membrane, and to PF00005.22 ABC_tran.
       0.655
EAU00720.3
Putative membrane protein, YGGT family; Pfam match to PF02325.12 YGGT.
  
  
 0.654
Your Current Organism:
Campylobacter curvus
NCBI taxonomy Id: 360105
Other names: C. curvus 525.92, Campylobacter curvus 525.92, Campylobacter curvus str. 525.92, Campylobacter curvus strain 525.92
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