STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS52473.1ABC transporter, ATP-binding/permease protein; Identified by match to protein family HMM PF00005. (584 aa)    
Predicted Functional Partners:
ABS51100.1
Hypothetical protein; Identified by glimmer; putative.
   
 0.916
ABS51099.1
Transcriptional regulator, AraC family; Identified by match to protein family HMM PF00165.
 
  
 0.895
ABS51541.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
0.826
ABS50954.1
Leukotoxin translocation ATP-binding protein LktB; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01846.
 
 
  
0.637
ABS51295.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
   
0.609
ABS52036.1
2-acyl-glycerophospho-ethanolamine acyltransferase; Identified by match to protein family HMM PF00501; match to protein family HMM PF01553; match to protein family HMM PF07690.
  
 0.467
ABS51926.1
Conserved hypothetical protein.
  
    0.463
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
    
 
 0.434
ABS52278.1
ABC transport system permease; Identified by match to protein family HMM PF02405; match to protein family HMM TIGR00056.
   
 
 0.429
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.422
Your Current Organism:
Campylobacter hominis
NCBI taxonomy Id: 360107
Other names: C. hominis ATCC BAA-381, Campylobacter hominis ATCC BAA-381, Campylobacter hominis str. ATCC BAA-381, Campylobacter hominis strain ATCC BAA-381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.