STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS52110.1Conserved hypothetical protein. (142 aa)    
Predicted Functional Partners:
rarD
RarD protein; Identified by match to protein family HMM PF00892; match to protein family HMM TIGR00688.
       0.791
ABS51964.1
3-deoxy-7-phosphoheptulonate synthase; Identified by match to protein family HMM PF01474; match to protein family HMM TIGR01358.
       0.578
ABS50959.1
Identified by match to protein family HMM PF01557.
       0.540
ABS51690.1
Conserved hypothetical protein.
       0.540
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.540
ABS51628.1
Fumarate reductase respiratory complex, transmembrane subunit; Identified by match to protein family HMM PF02967.
       0.429
ABS51888.1
Fumarate reductase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812.
       0.402
ABS51984.1
Fumarate reductase iron-sulfur subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
       0.402
Your Current Organism:
Campylobacter hominis
NCBI taxonomy Id: 360107
Other names: C. hominis ATCC BAA-381, Campylobacter hominis ATCC BAA-381, Campylobacter hominis str. ATCC BAA-381, Campylobacter hominis strain ATCC BAA-381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.