STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABS51791.1Transcriptional regulator, BadM/Rrf2 family; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. (137 aa)    
Predicted Functional Partners:
cysK
Cysteine synthase A; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.820
ABS51940.1
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.794
ABS51152.1
O-acetylhomoserine sulfhydrylase; Identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326.
       0.791
nifS
Cysteine desulfurase, NifS family; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR03403.
  
  
 0.774
ABS52464.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
ABS51700.1
Transcriptional regulator, BadM/Rrf2 family; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738.
  
     0.754
ABS52418.1
Hypothetical protein; Identified by glimmer; putative.
       0.551
ABS51431.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
 
     0.517
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
  
 0.514
ABS52155.1
Conserved hypothetical protein.
       0.454
Your Current Organism:
Campylobacter hominis
NCBI taxonomy Id: 360107
Other names: C. hominis ATCC BAA-381, Campylobacter hominis ATCC BAA-381, Campylobacter hominis str. ATCC BAA-381, Campylobacter hominis strain ATCC BAA-381
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.