Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABS51493.1 | ABS51573.1 | CHAB381_0438 | CHAB381_1345 | Identified by match to protein family HMM PF00497. | CjaC; Identified by match to protein family HMM PF00497. | 0.776 |
ABS51493.1 | ABS51908.1 | CHAB381_0438 | CHAB381_0433 | Identified by match to protein family HMM PF00497. | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | 0.894 |
ABS51493.1 | ABS52273.1 | CHAB381_0438 | CHAB381_0432 | Identified by match to protein family HMM PF00497. | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.896 |
ABS51573.1 | ABS51493.1 | CHAB381_1345 | CHAB381_0438 | CjaC; Identified by match to protein family HMM PF00497. | Identified by match to protein family HMM PF00497. | 0.776 |
ABS51573.1 | ABS51908.1 | CHAB381_1345 | CHAB381_0433 | CjaC; Identified by match to protein family HMM PF00497. | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | 0.842 |
ABS51573.1 | ABS52273.1 | CHAB381_1345 | CHAB381_0432 | CjaC; Identified by match to protein family HMM PF00497. | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.841 |
ABS51573.1 | ccoG | CHAB381_1345 | CHAB381_1346 | CjaC; Identified by match to protein family HMM PF00497. | Cytochrome c oxidase accessory protein CcoG; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02745. | 0.515 |
ABS51908.1 | ABS51493.1 | CHAB381_0433 | CHAB381_0438 | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | Identified by match to protein family HMM PF00497. | 0.894 |
ABS51908.1 | ABS51573.1 | CHAB381_0433 | CHAB381_1345 | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | CjaC; Identified by match to protein family HMM PF00497. | 0.842 |
ABS51908.1 | ABS52273.1 | CHAB381_0433 | CHAB381_0432 | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | 0.999 |
ABS52273.1 | ABS51493.1 | CHAB381_0432 | CHAB381_0438 | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Identified by match to protein family HMM PF00497. | 0.896 |
ABS52273.1 | ABS51573.1 | CHAB381_0432 | CHAB381_1345 | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | CjaC; Identified by match to protein family HMM PF00497. | 0.841 |
ABS52273.1 | ABS51908.1 | CHAB381_0432 | CHAB381_0433 | Amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726. | Glutamine transport ATP-binding protein GlnQ; Identified by match to protein family HMM PF00005. | 0.999 |
ccoG | ABS51573.1 | CHAB381_1346 | CHAB381_1345 | Cytochrome c oxidase accessory protein CcoG; Identified by match to protein family HMM PF00037; match to protein family HMM TIGR02745. | CjaC; Identified by match to protein family HMM PF00497. | 0.515 |