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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_4457CYFA0S03e03532g1_1. (177 aa)    
Predicted Functional Partners:
BON22_0587
CYFA0S01e05622g1_1; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.937
BON22_2255
CYFA0S05e00320g1_1.
   
 
 0.930
BON22_5246
Putative odorant-binding protein A5.
  
 
 0.924
BON22_4042
CYFA0S02e00408g1_1.
   
   0.921
BON22_4384
CYFA0S26e00166g1_1.
   
 
 0.919
BON22_3096
MRP-L46 domain-containing protein.
   
 
 0.916
BON22_1328
CYFA0S10e04500g1_1.
   
 
 0.915
BON22_3919
CYFA0S14e02476g1_1.
  
 
 0.910
BON22_3159
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.902
BON22_0340
CYFA0S01e11452g1_1.
   
 
 0.901
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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