STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_1431Nucleolar protein 6. (215 aa)    
Predicted Functional Partners:
BON22_2370
Ribosome biogenesis protein BMS1.
   
 
 0.982
BON22_3015
RNA 3'-terminal phosphate cyclase-like protein.
   
 
 0.971
BON22_5495
U3 small nucleolar RNA-associated protein 4.
   
   0.963
BON22_3770
Putative ATP-dependent RNA helicase DHR1.
   
 0.961
BON22_3885
rRNA biogenesis protein RRP5.
   
 
 0.957
BON22_4656
Small subunit processome component 20.
   
 
 0.953
BON22_2347
BP28CT domain-containing protein.
   
   0.947
BON22_1278
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.928
BON22_4377
CYFA0S26e00320g1_1.
   
 
 0.870
BON22_4518
CYFA0S03e02256g1_1.
   
 
 0.864
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.