STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_4646Geranylgeranyl pyrophosphate synthase. (163 aa)    
Predicted Functional Partners:
BON22_1535
Tryptophan synthase.
    
 0.963
BON22_5041
Squalene synthase.
  
 0.932
BON22_4175
Cytochrome b2, mitochondrial.
  
 
 0.921
BON22_3816
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.917
BON22_0922
Multifunctional tryptophan biosynthesis protein.
    
  0.908
BON22_1688
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.895
BON22_2780
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.868
BON22_1844
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.843
BON22_2284
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.836
BON22_2677
Hexaprenyl pyrophosphate synthase, mitochondrial; Belongs to the FPP/GGPP synthase family.
     
 0.832
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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