STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_3717Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating. (391 aa)    
Predicted Functional Partners:
BON22_4545
Histidine biosynthesis trifunctional protein.
    
  0.905
BON22_1535
Tryptophan synthase.
     
 0.903
BON22_2725
CYFA0S09e03928g1_1; Belongs to the universal ribosomal protein uS19 family.
   
 0.903
BON22_3882
CYFA0S14e03268g1_1.
   
 0.901
BON22_5340
CYFA0S12e01816g1_1; Belongs to the universal ribosomal protein uS3 family.
   
 0.899
BON22_2651
CYFA0S09e02212g1_1.
   
 0.898
BON22_1066
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.898
BON22_0793
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.897
BON22_1324
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.896
BON22_0677
CYFA0S01e03686g1_1.
   
 0.893
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.