STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_2993Transportin-3. (1014 aa)    
Predicted Functional Partners:
BON22_2976
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.963
BON22_2657
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.919
BON22_4852
RNA-binding protein 8A.
    
 
 0.895
BON22_2116
Protein mago nashi.
    
 
 0.894
BON22_5408
Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
    
 
 0.886
BON22_3385
Bifunctional purine biosynthetic protein ADE1.
   
 0.872
BON22_4214
Phosphoribosylglycinamide formyltransferase.
   
 0.872
BON22_4094
Eukaryotic translation initiation factor 5A.
    
 
 0.773
BON22_0792
Nucleoporin NUP2.
    
 
 0.680
BON22_5444
Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.574
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.