STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_3427Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (133 aa)    
Predicted Functional Partners:
BON22_0476
Trafficking protein particle complex subunit BET3.
   
 0.999
BON22_5344
Trafficking protein particle complex subunit 10.
    
 0.999
BON22_4397
Trafficking protein particle complex subunit 11.
    
 0.999
BON22_4920
TRAPP-associated protein TCA17.
   
 0.999
BON22_4207
Trafficking protein particle complex subunit 9.
    
 0.999
BON22_1228
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
   
 0.999
BON22_1013
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.999
BON22_0505
Trafficking protein particle complex III-specific subunit 85.
    
 0.999
BON22_2619
GTP-binding protein ypt1.
    
 0.978
BON22_0721
Uncharacterized protein.
    
 0.888
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.