STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_2404DNA repair protein RAD14. (347 aa)    
Predicted Functional Partners:
BON22_2813
DNA repair and recombination protein RAD26.
    
 0.997
BON22_0641
Transcription elongation factor S-II.
    
 0.992
BON22_5416
DNA repair helicase RAD3.
    
 0.980
BON22_1041
DNA repair protein RAD1.
    
 0.980
BON22_5181
DNA repair protein RAD10.
    
 0.979
BON22_0227
DNA repair helicase RAD25.
    
 0.974
BON22_4448
RNA polymerase II transcription factor B subunit 1.
    
 0.952
BON22_4182
Crossover junction endonuclease MUS81.
    
 0.931
BON22_2995
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.922
BON22_2610
Replication factor A protein 2.
    
 0.919
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.