Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BON22_1708Transcription factor zip1. (412 aa)    
Predicted Functional Partners:
BON22_5294
Cytochrome c oxidase subunit 6, mitochondrial.
   
 0.940
BON22_2013
Cytochrome c oxidase subunit 4, mitochondrial.
   
 0.926
BON22_0624
Cytochrome c oxidase subunit 6A, mitochondrial; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.925
BON22_1220
Cytochrome c oxidase polypeptide 5B, mitochondrial.
   
 0.919
BON22_0148
Cytochrome c oxidase polypeptide VIII, mitochondrial.
   
 0.907
BON22_2684
Transcriptional regulator CBF1.
   
 
 0.904
BON22_5506
Cytochrome c oxidase subunit 2.
    
  0.862
BON22_5507
F-box protein MET30.
    
 
 0.849
BON22_4725
F-box protein MET30.
    
 
 0.849
BON22_1670
BED-type domain-containing protein.
    
 0.833
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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