STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_1527Protein SYS1. (201 aa)    
Predicted Functional Partners:
BON22_0885
ADP-ribosylation factor-like protein 3.
    
 0.822
BON22_0390
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.671
BON22_0151
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
  0.660
BON22_0318
Conserved oligomeric Golgi complex subunit 8.
    
  0.630
BON22_2464
Conserved oligomeric Golgi complex subunit 5.
    
   0.574
BON22_0458
GTPase-activating protein gyp1.
    
   0.558
BON22_3659
Guanine nucleotide exchange factor subunit RIC1.
    
  0.469
BON22_4918
t-SNARE affecting a late Golgi compartment protein 2; Belongs to the syntaxin family.
    
  0.465
BON22_3705
Protein transport protein SEC24.
    
 
 0.419
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.