STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_1260Kinetochore protein NDC80. (574 aa)    
Predicted Functional Partners:
BON22_1627
Serine/threonine-protein kinase.
    
 0.797
BON22_0623
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.685
BON22_3848
Autophagy-related protein.
    
  0.654
BON22_2465
Casein kinase I hhp1; Belongs to the protein kinase superfamily.
    
 0.639
BON22_5325
Serine/threonine-protein kinase CAK1.
    
 0.619
BON22_4665
Cyclin-dependent kinase 1.
    
 0.619
BON22_0390
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.607
BON22_4118
Alternative oxidase.
    
 0.598
BON22_1578
Spindle pole body component alp14.
    
 
 0.598
BON22_4609
Serine/threonine-protein phosphatase.
    
 0.595
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.