Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
BON22_0448Myb-like DNA-binding protein BAS1. (582 aa)    
Predicted Functional Partners:
BON22_2236
Regulatory protein PHO2.
   
 
 0.991
BON22_2672
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 
 0.932
BON22_4665
Cyclin-dependent kinase 1.
   
 0.821
BON22_3221
Histone acetyltransferase type B subunit 2.
    
 0.803
BON22_4766
Histone acetyltransferase type B subunit 2.
    
 0.803
BON22_0800
Adenylosuccinate lyase.
    
 
 0.738
BON22_3715
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 
 0.624
BON22_0129
Mitochondrial import inner membrane translocase subunit TIM54.
     
 0.601
BON22_0911
Replication factor A protein 3.
    
 0.590
BON22_4388
Copia protein.
    
 0.590
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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