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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_0707Vacuolar protein sorting-associated protein 41. (752 aa)    
Predicted Functional Partners:
BON22_0146
Vacuolar protein sorting-associated protein 33; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.995
BON22_3481
Putative vacuolar protein sorting-associated protein 16.
    
 0.995
BON22_2920
Vacuolar morphogenesis protein 6.
   
 0.995
BON22_1889
E3 ubiquitin-protein ligase PEP5.
   
 0.995
BON22_0288
Vacuolar membrane protein PEP3.
    
 0.995
BON22_4622
Vacuolar protein sorting-associated protein 3.
   
 0.988
BON22_3829
Putative Ras-related protein Rab7.
    
 
 0.973
BON22_2395
CYFA0S04e03158g1_1.
    
 
 0.966
BON22_3106
Uncharacterized protein.
    
 
 0.965
BON22_4050
Vacuolar morphogenesis protein 7.
    
 
 0.964
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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