Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
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[Homology]
Score
BON22_0458GTPase-activating protein gyp1. (516 aa)    
Predicted Functional Partners:
BON22_2619
GTP-binding protein ypt1.
    
 
 0.982
BON22_1527
Protein SYS1.
    
   0.914
BON22_0151
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
   0.913
BON22_2464
Conserved oligomeric Golgi complex subunit 5.
    
   0.907
BON22_0318
Conserved oligomeric Golgi complex subunit 8.
    
   0.905
BON22_0885
ADP-ribosylation factor-like protein 3.
   
   0.903
BON22_0390
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.903
BON22_3167
Conserved oligomeric Golgi complex subunit 7.
    
   0.900
BON22_3829
Putative Ras-related protein Rab7.
    
 
 0.891
BON22_1820
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.867
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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