STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BON22_0902Transcriptional activator protein UGA3. (501 aa)    
Predicted Functional Partners:
BON22_3956
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.959
BON22_5128
Uncharacterized protein.
   
 0.886
BON22_0509
Actin-related protein 2; Belongs to the actin family.
   
 0.844
BON22_0126
Dynactin subunit 4.
   
 0.837
BON22_3386
CYFA0S02e08878g1_1.
    
 0.829
BON22_0257
CYFA0S01e13366g1_1; Belongs to the actin family.
   
 0.807
BON22_2792
Actin.
   
 0.807
BON22_2305
Actin-related protein 3; Belongs to the actin family.
   
 0.751
BON22_3739
Cytoplasmic dynein 1 intermediate chain 1.
    
 0.736
BON22_4524
Dynein heavy chain, cytoplasmic.
   
 0.715
Your Current Organism:
Cyberlindnera fabianii
NCBI taxonomy Id: 36022
Other names: C. fabianii, CBS 5640, CCRC 21415, CCRC:21415, Candida fabianii, Cyberlindnera fabianii (Wick.) Minter 2009, Hansenula fabianii, JCM 3601, Lindnera fabianii, Pichia fabianii
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